PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00303.1.g00140.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 159aa    MW: 17676.7 Da    PI: 8.2305
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00303.1.g00140.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-191667155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++y+GVr+++ +g+++AeIrd      ++ r++lg+f taeeAa+a+++a+  ++g
  Zpz_sc00303.1.g00140.1.sm.mk 16 TKYRGVRRRP-SGKFAAEIRDS---RrQSERIWLGTFNTAEEAARAYDRAAYIMRG 67
                                  69********.7*********3...2345***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.53E-181675No hitNo description
PfamPF008472.5E-141667IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-221775IPR016177DNA-binding domain
SMARTSM003801.6E-311781IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.5E-301775IPR001471AP2/ERF domain
PROSITE profilePS5103222.4051775IPR001471AP2/ERF domain
PRINTSPR003671.1E-91829IPR001471AP2/ERF domain
PRINTSPR003671.1E-94157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MEGCACEHGK DSIEVTKYRG VRRRPSGKFA AEIRDSRRQS ERIWLGTFNT AEEAARAYDR  60
AAYIMRGQLA VLNFPGEAHN YVRGSSSSQQ PQQGAGGGGS GRRAIELEYL DDKVLQDLLL  120
KGDDGKKEAS SEVAVEMAKE TDRHRDKEIS PAMLKHHLN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-231875663ATERF1
3gcc_A9e-231875663ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006660393.15e-40PREDICTED: ethylene-responsive transcription factor 14-like
SwissprotQ9LSX02e-33ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLK3YCJ34e-48K3YCJ3_SETIT; Uncharacterized protein
STRINGSi011941m1e-47(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.13e-22ERF family protein